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Princeton University High Throughput Sequencing Database

Researcher Login Info
HTSEQ now requires a valid Princeton account, as usage is now dependent on login with Princeton's Central Authentication Service (CAS).
  • If you are a Princeton researcher, login here.

  • If you are an external user, you must acquire a sponsored account, either communicating with your collaborator or the genomics-core.

Welcome to the Princeton University High Throughput Sequencing Database project at the Lewis-Sigler Institute. This project, currently under development, attempts to model and store the data produced by high-throughput sequencing analyses. For microarray-based assays, please visit the PUMA project.


Scheduled downtime! The HTSEQ project has some upcoming scheduled downtime, so that we may update our system's hardware.

  1. NO ACCESS ~11PM Saturday July 20th through ~11AM Monday, July 22nd, while the database and software is being synchronized and configured
  2. READ-ONLY ACCESS part of Monday, July 22, for our final deployment check
Please accept our apologies for any inconvenience this might cause.

2019-04-09 : New Features!

  • Added support for downsampling raw sequence prior to performing the longranger wgs pipeline.

2019-02-19 : New Features!

HTSEQ is funded in part by the National Institute of General Medical Sciences (NIGMS) [NIH grant P50 GM071508]. HTSEQ is a project within the Lewis-Sigler Institute for Integrative Genomics of Princeton University. Some HTSEQ software was derived from microarray database software produced by both the PUMAdb and SMD projects.

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied.