Your session is inactive. Please login.
Princeton University High Throughput Sequencing Database

Researcher Login Info
HTSEQ now requires a valid Princeton account, as usage is now dependent on login with Princeton's Central Authentication Service (CAS).
  • If you are a Princeton researcher, login here.

  • If you are an external user, you must acquire a sponsored account, either communicating with your collaborator or the genomics-core.

Welcome to the Princeton University High Throughput Sequencing Database project at the Lewis-Sigler Institute. This project, currently under development, attempts to model and store the data produced by high-throughput sequencing analyses. For microarray-based assays, please visit the PUMA project.


2021-08-04 : Update!

  • Support for cellranger v6.0.1 added, including support for the --include-introns counting option.

2020-11-16 : Update!

  • Support for cellranger v4.0.0 added.

2020-11-01 : New Features!

  • Demultiplexing now being performed by fastq-multx on the genomics cluster.

HTSEQ is funded in part by the National Institute of General Medical Sciences (NIGMS) [NIH grant P50 GM071508]. HTSEQ is a project within the Lewis-Sigler Institute for Integrative Genomics of Princeton University. Some HTSEQ software was derived from microarray database software produced by both the PUMAdb and SMD projects.

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied.